feat(dx): add fastmcp.json configs, module-level tool registration, tool timeout

- Add fastmcp.http.json and fastmcp.stdio.json declarative server configs
  for streamable-http (:6970) and stdio transports respectively
- Move register_all_modules() to module level in server.py so
  `fastmcp run server.py --reload` discovers the fully-wired mcp object
  without going through run_server() — tools registered exactly once
- Add timeout=120 to @mcp.tool() decorator as a global safety net;
  any hung subaction returns a clean MCP error instead of hanging forever
- Document fastmcp run --reload, fastmcp list, fastmcp call in README
- Bump version 1.0.1 → 1.1.0

Co-authored-by: Claude <claude@anthropic.com>

unraid_mcp/server.py

@@ -85,6 +85,10 @@ mcp = FastMCP(
 # Note: SubscriptionManager singleton is defined in subscriptions/manager.py
 # and imported by resources.py - no duplicate instance needed here
 
+# Register all modules at import time so `fastmcp run server.py --reload` can
+# discover the fully-configured `mcp` object without going through run_server().
+# run_server() no longer calls this — tools are registered exactly once here.
+
 
 def register_all_modules() -> None:
     """Register all tools and resources with the MCP instance."""
@@ -103,6 +107,9 @@ def register_all_modules() -> None:
         raise
 
 
+register_all_modules()
+
+
 def run_server() -> None:
     """Run the MCP server with the configured transport."""
     # Validate required configuration before anything else
@@ -125,9 +132,6 @@ def run_server() -> None:
             "Only use this in trusted networks or for development."
         )
 
-    # Register all modules
-    register_all_modules()
-
     logger.info(
         f"Starting Unraid MCP Server on {UNRAID_MCP_HOST}:{UNRAID_MCP_PORT} using {UNRAID_MCP_TRANSPORT} transport..."
     )

unraid_mcp/tools/unraid.py

@@ -1722,7 +1722,7 @@ UNRAID_ACTIONS = Literal[
 def register_unraid_tool(mcp: FastMCP) -> None:
     """Register the single `unraid` tool with the FastMCP instance."""
 
-    @mcp.tool()
+    @mcp.tool(timeout=120)
     async def unraid(
         action: UNRAID_ACTIONS,
         subaction: str,