Migrate to uv and FastMCP architecture with comprehensive tooling

- Replace pip/requirements.txt with uv and pyproject.toml
- Restructure as single-file MCP server using FastMCP
- Add comprehensive Unraid management tools (containers, VMs, storage, logs)
- Implement multiple transport support (streamable-http, SSE, stdio)
- Add robust error handling and timeout management
- Include project documentation and API feature tracking
- Remove outdated cline documentation structure

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>

pyproject.toml

@@ -0,0 +1,144 @@
+[build-system]
+requires = ["hatchling"]
+build-backend = "hatchling.build"
+
+[project]
+name = "unraid-mcp"
+version = "0.1.0"
+description = "MCP Server for Unraid API - provides tools to interact with an Unraid server's GraphQL API"
+authors = [
+    {name = "Your Name", email = "your.email@example.com"}
+]
+readme = "README.md"
+license = {text = "MIT"}
+requires-python = ">=3.10"
+classifiers = [
+    "Development Status :: 4 - Beta",
+    "Intended Audience :: Developers",
+    "License :: OSI Approved :: MIT License",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
+]
+keywords = ["unraid", "mcp", "graphql", "api", "server"]
+
+dependencies = [
+    "python-dotenv>=1.1.1",
+    "fastmcp>=2.11.2",
+    "httpx>=0.28.1",
+    "fastapi>=0.116.1",
+    "uvicorn>=0.35.0",
+    "websockets>=14.1",
+]
+
+[project.optional-dependencies]
+dev = [
+    "pytest>=8.4.1",
+    "pytest-asyncio>=1.1.0",
+    "black>=25.1.0",
+    "ruff>=0.12.8",
+    "mypy>=1.17.1",
+    "types-python-dateutil",
+]
+
+[project.urls]
+Homepage = "https://github.com/your-username/unraid-mcp"
+Repository = "https://github.com/your-username/unraid-mcp"
+Issues = "https://github.com/your-username/unraid-mcp/issues"
+
+[project.scripts]
+unraid-mcp-server = "unraid_mcp_server:main"
+
+[tool.hatch.build.targets.wheel]
+only-include = ["unraid_mcp_server.py"]
+
+[tool.black]
+line-length = 100
+target-version = ['py310']
+include = '\.pyi?$'
+extend-exclude = '''
+/(
+  # directories
+  \.eggs
+  | \.git
+  | \.hg
+  | \.mypy_cache
+  | \.tox
+  | \.venv
+  | build
+  | dist
+)/
+'''
+
+[tool.ruff]
+target-version = "py310"
+line-length = 100
+select = [
+    "E",  # pycodestyle errors
+    "W",  # pycodestyle warnings
+    "F",  # pyflakes
+    "I",  # isort
+    "B",  # flake8-bugbear
+    "C4", # flake8-comprehensions
+    "UP", # pyupgrade
+]
+ignore = [
+    "E501",  # line too long, handled by black
+    "B008",  # do not perform function calls in argument defaults
+    "C901",  # too complex
+]
+
+[tool.ruff.per-file-ignores]
+"__init__.py" = ["F401"]
+
+[tool.mypy]
+python_version = "3.10"
+check_untyped_defs = true
+disallow_any_generics = true
+disallow_incomplete_defs = true
+disallow_untyped_defs = true
+no_implicit_optional = true
+warn_redundant_casts = true
+warn_unused_ignores = true
+warn_return_any = true
+strict_equality = true
+
+[tool.pytest.ini_options]
+asyncio_mode = "auto"
+testpaths = ["tests"]
+python_files = ["test_*.py", "*_test.py"]
+python_classes = ["Test*"]
+python_functions = ["test_*"]
+addopts = [
+    "-ra",
+    "--strict-markers",
+    "--strict-config",
+    "--cov=unraid_mcp_server",
+    "--cov-report=term-missing",
+    "--cov-report=html",
+    "--cov-report=xml",
+]
+markers = [
+    "slow: marks tests as slow (deselect with '-m \"not slow\"')",
+    "integration: marks tests as integration tests",
+]
+
+[tool.coverage.run]
+source = ["unraid_mcp_server"]
+branch = true
+
+[tool.coverage.report]
+exclude_lines = [
+    "pragma: no cover",
+    "def __repr__",
+    "if self.debug:",
+    "if settings.DEBUG",
+    "raise AssertionError",
+    "raise NotImplementedError",
+    "if 0:",
+    "if __name__ == .__main__.:",
+    "class .*\\bProtocol\\):",
+    "@(abc\\.)?abstractmethod",
+]